Closed arudhir closed 1 year ago
> mg.query('P62993-1', scope='uniprot.Swiss-Prot', fields='symbol') # works {'took': 7, 'total': 1, 'max_score': 0.99839664, 'hits': [{'_id': '2885', '_score': 0.99839664, 'symbol': 'GRB2'}]} > mg.querymany('P62993-1', scope='uniprot.Swiss-Prot', fields='symbol') # doesn't work [{'query': 'P62993-1', 'notfound': True}] > mg.querymany('P62993', scope='uniprot.Swiss-Prot', fields='symbol') # failure not caused by isoform information [{'query': 'P62993', 'notfound': True}] > mg.querymany(['P62993-1'], scope='uniprot.Swiss-Prot', fields='symbol') [{'query': 'P62993-1', 'notfound': True}] > mg.querymany(['P62993'], scope='uniprot.Swiss-Prot', fields='symbol') [{'query': 'P62993', 'notfound': True}]
For what it's worth, P62993-1 is the canonical sequence as well: https://www.uniprot.org/uniprotkb/P62993/entry#P62993-1
Edit: Closed because I think "uniprot" is serving me better as a scope.
https://docs.mygene.info/en/latest/doc/data.html#available-fields
For what it's worth, P62993-1 is the canonical sequence as well: https://www.uniprot.org/uniprotkb/P62993/entry#P62993-1
Edit: Closed because I think "uniprot" is serving me better as a scope.
https://docs.mygene.info/en/latest/doc/data.html#available-fields