automate updates of DISEASES and TISSUES APIs

biothings / pending.api

Set of standalone APIs built with the BioThings SDK for the Translator Project

https://biothings.ncats.io

Apache License 2.0

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automate updates of DISEASES and TISSUES APIs #117

Open andrewsu opened 1 year ago

andrewsu commented 1 year ago

From the timestamps in https://download.jensenlab.org/, it looks like the data underlying the DISEASES and TISSUES APIs are updated ~weekly. The current APIs have not been refreshed since Aug 2020 for DISEASES and Sep 2022 for TISSUES. Not a huge priority, but it would be good to automate the updates here to whatever extent is reasonable.

colleenXu commented 1 year ago

Related issues

changing the record format: https://github.com/biothings/pending.api/issues/26
previous issue listing multiple pending APIs to update, including DISEASES https://github.com/biothings/pending.api/issues/25
original issue for DISEASES: https://github.com/biothings/pending.api/issues/7

colleenXu commented 7 months ago

Quick note: also related to this issue https://github.com/biothings/biothings.api/issues/235

everaldorodrigo commented 2 months ago

It's configured now to download and build automatically for DISEASES and TISSUES data.

After few weeks, If everything looks good, we could configure to auto release the data to CI, Test, and/or Prod.