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bioturing / hera-t

Hera-T, a fast and accurate tool for estimating gene abundances in single cell data generated by the 10X-Chromium protocol
https://bioturing.com/herat
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Segmentation fault #21

Open hbin-bot opened 4 years ago

hbin-bot commented 4 years ago

When I try to repeat the example, I ran into the Segmentation fault.

$ ./hera-T count -t 32 -o tmp -x cr_mm10_210/cr_mm10_210 -l 0 -1 neuron_1k_v2_fastqs/neuron_1k_v2_S1_L001_R1_001.fastq.gz neuron_1k_v2_fastqs/neuron_1k_v2_S1_L002_R1_001.fastq.gz -2 neuron_1k_v2_fastqs/neuron_1k_v2_S1_L001_R2_001.fastq.gz neuron_1k_v2_fastqs/neuron_1k_v2_S1_L002_R2_001.fastq.gz

The error message is as below:

Hera-T is a program developed by BioTuring for ScRNA-Seq analysis
Please contact info@bioturing.com if you need further support
This is an academic version, which is free for academic labs
No IP or commercial work can be derived from using this free academic version
If you are using Hera-T for IP or commercial related work, please contact
info@bioturing.com to obtain a license
Cite Hera-T paper at: https://doi.org/10.1101/530501
Version: 0.2.2

[INFO] Log file: [tmp/HeraT.log]
Loading BWT...
Segmentation fault (core dumped)

Sever info: ubuntu 18.04.3