I am trying to find the marker genes of a certain cluster with respect to all other clusters in my Seurat v3 object. In order to do this, I would have to set the only.pos parameter to TRUE or else I would get also markers of the rest of the clusters. However, when I do this, I still see negative logfc values.
Hello,
I am trying to find the marker genes of a certain cluster with respect to all other clusters in my Seurat v3 object. In order to do this, I would have to set the only.pos parameter to TRUE or else I would get also markers of the rest of the clusters. However, when I do this, I still see negative logfc values.
Thank you