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bioversity / Crop-Ontology

An ontology database for crops' traits with their variables
http://www.cropontology.org/
GNU Affero General Public License v3.0
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RDF/OWL files for CO? #229

Open Hannah-Doerpholz opened 6 months ago

Hannah-Doerpholz commented 6 months ago

We wanted to add your ontology/ontologies to our terminology service in DataPLANT. However, we could not find any RDF or OWL files. Are there any files for other users they can incorporate (as markup like xml and tabular formats don't work for us) into their services?

marieALaporte commented 6 months ago

hi @Hannah-Doerpholz, we have RDF/OWL files for each of our ontologies. You can find them on the interface by clicking on the icon shown below.

Capture d’écran 2024-02-26 à 16 11 07

You can also get all our files programatically by calling on an URL following this pattern: https://cropontology.org/rdf/CO_ID.owl (change CO_ID by an actual CO ID, you can get the list of our ontologies here)

Hannah-Doerpholz commented 6 months ago

Thank you for your swift reply! It's really good to know the programmatic access to the different ontology files too. I will try to see if we can work with this, since the xml markup might give us some issues. I see that I can load the ontologies in Protégé using the "load from URL" option and then save that file separately to get the correct links to the different prefixes like skos or dcterms, but I can't copy the information from the web when I just click the download icon and save the result manually.