Allow for unified adapters and contaminations input and set a default.

biowdl / tasks

A collection of reusable WDL tasks. Category:Other

https://biowdl.github.io/tasks/

MIT License

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Closed rhpvorderman closed 5 years ago

rhpvorderman commented 5 years ago

This whole PR is a workaround for issues in Cromwell. This was deemed the least ugly of the alternatives.

Also cutadapt was updated to version 2.3 because it should have speed improvements.