Allow setting --emit-ref-confidence flag on haplotypecaller

biowdl / tasks

A collection of reusable WDL tasks. Category:Other

https://biowdl.github.io/tasks/

MIT License

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Closed rhpvorderman closed 4 years ago

rhpvorderman commented 4 years ago

I need this for a project where I need to call al sites. I have to use the BP_RESOLUTION mode. So I have added this as a possiblity to the task.