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bird-house / birdhouse-deploy

Scripts and configurations to deploy the various birds and servers required for a full-fledged production platform
https://birdhouse-deploy.readthedocs.io/en/latest/
Apache License 2.0
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weaver: bump version to 5.1.0 + debug notebook output #449

Closed fmigneault closed 5 months ago

fmigneault commented 5 months ago

Overview

Debugging cause of diff in final output of https://github.com/Ouranosinc/pavics-sdi/blob/master/docs/source/notebook-components/weaver_example.ipynb

Built on top of https://github.com/bird-house/birdhouse-deploy/pull/439

Changes

Non-breaking changes

Related Issue / Discussion

crim-jenkins-bot commented 5 months ago

E2E Test Results

DACCS-iac Pipeline Results

Build URL : http://daccs-jenkins.crim.ca:80/job/DACCS-iac-birdhouse/2612/
Result :white_check_mark: SUCCESS

BIRDHOUSE_DEPLOY_BRANCH : fix-weaver-retry
DACCS_IAC_BRANCH : master
DACCS_CONFIGS_BRANCH : master
PAVICS_E2E_WORKFLOW_TESTS_BRANCH : master
PAVICS_SDI_BRANCH : master

DESTROY_INFRA_ON_EXIT : true
PAVICS_HOST : https://host-140-154.rdext.crim.ca

PAVICS-e2e-workflow-tests Pipeline Results

Tests URL : http://daccs-jenkins.crim.ca:80/job/PAVICS-e2e-workflow-tests/job/master/1586/

NOTEBOOK TEST RESULTS 
    
[2024-04-23T15:06:24.595Z] ============================= test session starts ==============================
[2024-04-23T15:06:24.595Z] platform linux -- Python 3.9.16, pytest-7.3.1, pluggy-1.0.0
[2024-04-23T15:06:24.595Z] rootdir: /home/jenkins/agent/workspace/PAVICS-e2e-workflow-tests_master
[2024-04-23T15:06:24.595Z] plugins: anyio-3.6.1, dash-2.10.0, nbval-0.9.6, tornasync-0.6.0.post2, xdist-3.3.1
[2024-04-23T15:06:24.595Z] collected 259 items
[2024-04-23T15:06:24.595Z] 
[2024-04-23T15:06:35.804Z] notebooks-auth/geoserver.ipynb ..................                        [  6%]
[2024-04-23T15:07:14.762Z] notebooks-auth/test_cowbird_jupyter.ipynb ..........                     [ 10%]
[2024-04-23T15:07:18.538Z] notebooks-auth/test_thredds.ipynb ...........                            [ 15%]
[2024-04-23T15:08:05.314Z] pavics-sdi-master/docs/source/notebooks/CaSR_basic.ipynb ......          [ 17%]
[2024-04-23T15:08:13.634Z] pavics-sdi-master/docs/source/notebooks/WCS_example.ipynb .......        [ 20%]
[2024-04-23T15:08:23.346Z] pavics-sdi-master/docs/source/notebooks/WFS_example.ipynb ......         [ 22%]
[2024-04-23T15:08:29.736Z] pavics-sdi-master/docs/source/notebooks/WMS_example.ipynb ........       [ 25%]
[2024-04-23T15:15:50.434Z] pavics-sdi-master/docs/source/notebooks/climex.ipynb ............        [ 30%]
[2024-04-23T15:15:52.349Z] pavics-sdi-master/docs/source/notebooks/eccc-geoapi-climate-stations.ipynb . [ 30%]
[2024-04-23T15:16:00.647Z] ...............                                                          [ 36%]
[2024-04-23T15:16:09.714Z] pavics-sdi-master/docs/source/notebooks/eccc-geoapi-xclim.ipynb .....    [ 38%]
[2024-04-23T15:16:16.556Z] pavics-sdi-master/docs/source/notebooks/esgf-dap.ipynb ......            [ 40%]
[2024-04-23T15:16:32.450Z] pavics-sdi-master/docs/source/notebooks/forecasts.ipynb ......           [ 42%]
[2024-04-23T15:16:39.438Z] pavics-sdi-master/docs/source/notebooks/opendap.ipynb .......            [ 45%]
[2024-04-23T15:16:44.202Z] pavics-sdi-master/docs/source/notebooks/pavics_thredds.ipynb .....       [ 47%]
[2024-04-23T15:22:09.482Z] pavics-sdi-master/docs/source/notebooks/regridding.ipynb ............... [ 53%]
[2024-04-23T15:23:21.069Z] .............                                                            [ 58%]
[2024-04-23T15:23:23.512Z] pavics-sdi-master/docs/source/notebooks/rendering.ipynb ....             [ 59%]
[2024-04-23T15:23:26.038Z] pavics-sdi-master/docs/source/notebooks/subset-user-input.ipynb ........ [ 62%]
[2024-04-23T15:23:43.053Z] .................                                                        [ 69%]
[2024-04-23T15:23:50.001Z] pavics-sdi-master/docs/source/notebooks/subsetting.ipynb ......          [ 71%]
[2024-04-23T15:24:01.069Z] finch-master/docs/source/notebooks/dap_subset.ipynb ...........          [ 76%]
[2024-04-23T15:24:10.066Z] finch-master/docs/source/notebooks/finch-usage.ipynb ......              [ 78%]
[2024-04-23T15:24:11.451Z] PAVICS-landing-master/content/notebooks/climate_indicators/PAVICStutorial_ClimateDataAnalysis-1DataAccess.ipynb . [ 78%]
[2024-04-23T15:24:14.257Z] ......                                                                   [ 81%]
[2024-04-23T15:24:20.840Z] PAVICS-landing-master/content/notebooks/climate_indicators/PAVICStutorial_ClimateDataAnalysis-2Subsetting.ipynb . [ 81%]
[2024-04-23T15:24:35.354Z] .............                                                            [ 86%]
[2024-04-23T15:24:45.364Z] PAVICS-landing-master/content/notebooks/climate_indicators/PAVICStutorial_ClimateDataAnalysis-3Climate-Indicators.ipynb . [ 86%]
[2024-04-23T15:25:23.415Z] ....s.                                                                   [ 89%]
[2024-04-23T15:25:31.570Z] PAVICS-landing-master/content/notebooks/climate_indicators/PAVICStutorial_ClimateDataAnalysis-4Ensembles.ipynb . [ 89%]
[2024-04-23T15:25:44.845Z] ..                                                                       [ 90%]
[2024-04-23T15:25:59.761Z] PAVICS-landing-master/content/notebooks/climate_indicators/PAVICStutorial_ClimateDataAnalysis-5Visualization.ipynb . [ 90%]
[2024-04-23T15:26:23.089Z] ......                                                                   [ 93%]
[2024-04-23T15:26:24.730Z] notebooks/hummingbird.ipynb ............                                 [ 97%]
[2024-04-23T15:28:59.156Z] notebooks/stress-tests.ipynb ......                                      [100%]
[2024-04-23T15:28:59.156Z] 
[2024-04-23T15:28:59.156Z] ================= 258 passed, 1 skipped in 1348.26s (0:22:28) ==================
fmigneault commented 5 months ago

@mishaschwartz So, I still have no idea what could be the cause of the hummingbird output sporadically differing from the notebook cell, but all tests are now succeeding.

fmigneault commented 5 months ago

Hold up! Weaver notebook was not actually tested during that run... weird. 🕵️ investigating

fmigneault commented 5 months ago

Found the cause. Due to invalid sourcing of env.local over capturing outputs to pass to TEST_PAVICS_SDI_WEAVER.

PR in progress to fix (https://gitlab.com/crim.ca/clients/daccs/daccs-e2e-jenkins/-/merge_requests/33). Will rerun once integrated.

crim-jenkins-bot commented 5 months ago

E2E Test Results

DACCS-iac Pipeline Results

Build URL : http://daccs-jenkins.crim.ca:80/job/DACCS-iac-birdhouse/2624/
Result :x: FAILURE

BIRDHOUSE_DEPLOY_BRANCH : fix-weaver-retry
DACCS_IAC_BRANCH : master
DACCS_CONFIGS_BRANCH : master
PAVICS_E2E_WORKFLOW_TESTS_BRANCH : master
PAVICS_SDI_BRANCH : master

DESTROY_INFRA_ON_EXIT : true
PAVICS_HOST : https://host-140-154.rdext.crim.ca

PAVICS-e2e-workflow-tests Pipeline Results

Tests URL : http://daccs-jenkins.crim.ca:80/job/PAVICS-e2e-workflow-tests/job/master/1590/

NOTEBOOK TEST RESULTS 
    
[2024-05-01T14:46:23.376Z] ============================= test session starts ==============================
[2024-05-01T14:46:23.376Z] platform linux -- Python 3.9.16, pytest-7.3.1, pluggy-1.0.0
[2024-05-01T14:46:23.376Z] rootdir: /home/jenkins/agent/workspace/PAVICS-e2e-workflow-tests_master
[2024-05-01T14:46:23.376Z] plugins: anyio-3.6.1, dash-2.10.0, nbval-0.9.6, tornasync-0.6.0.post2, xdist-3.3.1
[2024-05-01T14:46:23.376Z] collected 269 items
[2024-05-01T14:46:23.376Z] 
[2024-05-01T14:46:33.689Z] notebooks-auth/geoserver.ipynb ..................                        [  6%]
[2024-05-01T14:47:02.490Z] notebooks-auth/test_cowbird_jupyter.ipynb ..........                     [ 10%]
[2024-05-01T14:47:06.449Z] notebooks-auth/test_thredds.ipynb ...........                            [ 14%]
[2024-05-01T14:47:54.295Z] pavics-sdi-master/docs/source/notebooks/CaSR_basic.ipynb ......          [ 16%]
[2024-05-01T14:48:03.280Z] pavics-sdi-master/docs/source/notebooks/WCS_example.ipynb .......        [ 19%]
[2024-05-01T14:48:13.350Z] pavics-sdi-master/docs/source/notebooks/WFS_example.ipynb ......         [ 21%]
[2024-05-01T14:48:17.210Z] pavics-sdi-master/docs/source/notebooks/WMS_example.ipynb .FFFFFFF       [ 24%]
[2024-05-01T14:55:55.138Z] pavics-sdi-master/docs/source/notebooks/climex.ipynb ............        [ 28%]
[2024-05-01T14:55:55.138Z] pavics-sdi-master/docs/source/notebooks/eccc-geoapi-climate-stations.ipynb . [ 29%]
[2024-05-01T14:55:55.928Z] ...............                                                          [ 34%]
[2024-05-01T14:56:04.869Z] pavics-sdi-master/docs/source/notebooks/eccc-geoapi-xclim.ipynb .....    [ 36%]
[2024-05-01T14:56:11.980Z] pavics-sdi-master/docs/source/notebooks/esgf-dap.ipynb ......            [ 39%]
[2024-05-01T14:56:28.381Z] pavics-sdi-master/docs/source/notebooks/forecasts.ipynb ......           [ 41%]
[2024-05-01T14:56:33.774Z] pavics-sdi-master/docs/source/notebooks/opendap.ipynb .......            [ 43%]
[2024-05-01T14:56:38.642Z] pavics-sdi-master/docs/source/notebooks/pavics_thredds.ipynb .....       [ 45%]
[2024-05-01T15:00:06.074Z] pavics-sdi-master/docs/source/notebooks/regridding.ipynb ............... [ 51%]
[2024-05-01T15:01:18.809Z] .............                                                            [ 56%]
[2024-05-01T15:01:21.567Z] pavics-sdi-master/docs/source/notebooks/rendering.ipynb ....             [ 57%]
[2024-05-01T15:01:23.886Z] pavics-sdi-master/docs/source/notebooks/subset-user-input.ipynb ........ [ 60%]
[2024-05-01T15:01:41.388Z] .................                                                        [ 66%]
[2024-05-01T15:01:48.058Z] pavics-sdi-master/docs/source/notebooks/subsetting.ipynb ......          [ 69%]
[2024-05-01T15:01:49.446Z] pavics-sdi-master/docs/source/notebook-components/weaver_example.ipynb . [ 69%]
[2024-05-01T15:02:07.217Z] ........F                                                                [ 72%]
[2024-05-01T15:02:16.590Z] finch-master/docs/source/notebooks/dap_subset.ipynb ...........          [ 76%]
[2024-05-01T15:02:25.592Z] finch-master/docs/source/notebooks/finch-usage.ipynb ......              [ 79%]
[2024-05-01T15:02:26.971Z] PAVICS-landing-master/content/notebooks/climate_indicators/PAVICStutorial_ClimateDataAnalysis-1DataAccess.ipynb . [ 79%]
[2024-05-01T15:02:30.048Z] ......                                                                   [ 81%]
[2024-05-01T15:02:40.051Z] PAVICS-landing-master/content/notebooks/climate_indicators/PAVICStutorial_ClimateDataAnalysis-2Subsetting.ipynb . [ 82%]
[2024-05-01T15:02:54.929Z] .............                                                            [ 86%]
[2024-05-01T15:03:04.959Z] PAVICS-landing-master/content/notebooks/climate_indicators/PAVICStutorial_ClimateDataAnalysis-3Climate-Indicators.ipynb . [ 87%]
[2024-05-01T15:03:43.802Z] ....s.                                                                   [ 89%]
[2024-05-01T15:03:51.942Z] PAVICS-landing-master/content/notebooks/climate_indicators/PAVICStutorial_ClimateDataAnalysis-4Ensembles.ipynb . [ 89%]
[2024-05-01T15:04:04.756Z] ..                                                                       [ 90%]
[2024-05-01T15:04:19.672Z] PAVICS-landing-master/content/notebooks/climate_indicators/PAVICStutorial_ClimateDataAnalysis-5Visualization.ipynb . [ 91%]
[2024-05-01T15:04:41.791Z] ......                                                                   [ 93%]
[2024-05-01T15:04:44.551Z] notebooks/hummingbird.ipynb ............                                 [ 97%]
[2024-05-01T15:07:18.723Z] notebooks/stress-tests.ipynb ......                                      [100%]
[2024-05-01T15:07:18.723Z] 
[2024-05-01T15:07:18.723Z] =================================== FAILURES ===================================