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bird-house / flyingpigeon

WPS processes for climate model data, indices and extreme events
http://flyingpigeon.readthedocs.io/en/latest/
Apache License 2.0
19 stars 15 forks source link

Install fails with import error (scipy) #248

Closed cehbrecht closed 6 years ago

cehbrecht commented 6 years ago

Flyingpigeon install fails currently maybe caused by an dependency issue (scipy):

Develop: '/home/travis/build/bird-house/flyingpigeon/.'
Traceback (most recent call last):
  File "/tmp/tmpdUcA0s", line 14, in <module>
    exec(compile(f.read(), '/home/travis/build/bird-house/flyingpigeon/./setup.py', 'exec'))
  File "/home/travis/build/bird-house/flyingpigeon/./setup.py", line 5, in <module>
    version = __import__('flyingpigeon').__version__
  File "/home/travis/build/bird-house/flyingpigeon/./flyingpigeon/__init__.py", line 1, in <module>
    from .wsgi import application
  File "/home/travis/build/bird-house/flyingpigeon/./flyingpigeon/wsgi.py", line 4, in <module>
    from .processes import processes
  File "/home/travis/build/bird-house/flyingpigeon/./flyingpigeon/processes/__init__.py", line 22, in <module>
    from .wps_spatial_analog import SpatialAnalogProcess
  File "/home/travis/build/bird-house/flyingpigeon/./flyingpigeon/processes/wps_spatial_analog.py", line 25, in <module>
    from flyingpigeon.ocgisDissimilarity import Dissimilarity, metrics
  File "/home/travis/build/bird-house/flyingpigeon/./flyingpigeon/ocgisDissimilarity.py", line 1, in <module>
    import dissimilarity as dd
  File "/home/travis/build/bird-house/flyingpigeon/./flyingpigeon/dissimilarity.py", line 3, in <module>
    from scipy import spatial
  File "/home/travis/.conda/envs/flyingpigeon/lib/python2.7/site-packages/scipy/spatial/__init__.py", line 94, in <module>
    from .kdtree import *
  File "/home/travis/.conda/envs/flyingpigeon/lib/python2.7/site-packages/scipy/spatial/kdtree.py", line 8, in <module>
    import scipy.sparse
  File "/home/travis/.conda/envs/flyingpigeon/lib/python2.7/site-packages/scipy/sparse/__init__.py", line 229, in <module>
    from .csr import *
  File "/home/travis/.conda/envs/flyingpigeon/lib/python2.7/site-packages/scipy/sparse/csr.py", line 15, in <module>
    from ._sparsetools import csr_tocsc, csr_tobsr, csr_count_blocks, \
ImportError: /home/travis/.conda/envs/flyingpigeon/lib/python2.7/site-packages/lxml/../../../././libstdc++.so.6: version `CXXABI_1.3.9' not found (required by /home/travis/.conda/envs/flyingpigeon/lib/python2.7/site-packages/scipy/sparse/_sparsetools.so)