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bird-house / flyingpigeon

WPS processes for climate model data, indices and extreme events
http://flyingpigeon.readthedocs.io/en/latest/
Apache License 2.0
19 stars 15 forks source link

pinning conda packages #46

Closed nilshempelmann closed 8 years ago

nilshempelmann commented 8 years ago

pinning required conda build-outs for stable environment

nilshempelmann commented 8 years ago

current environment is quite large: [nhempel@lsce3199 flyingpigeon]$ conda list -n birdhouse

packages in environment at /homel/nhempel/.conda/envs/birdhouse:

# alabaster 0.7.7 py27_0
argcomplete 1.0.0 py27_1
glib 2.43.0 2 asmeurer libgcc 4.8.5 1 asmeurer babel 2.2.0 py27_0
backports 1.0 py27_0
backports_abc 0.4 py27_0
pymongo 3.2.2 py27_0 binstar r-mclust 5.1 r3.2.2_0 bioconda amqp 1.4.8 py27_0 birdhouse anyjson 0.3.3 py27_0 birdhouse billiard 3.3.0.21 py27_0 birdhouse bird-feeder 0.2.0 py27_0 birdhouse castf90 0.1.1 3 birdhouse cdat-lite 6.0rc2 nppy27_0 birdhouse celery 3.1.19 py27_0 birdhouse cfchecker 2.0.9 py27_0 birdhouse esgf-pyclient 0.1.6 py27_51 birdhouse eventlet 0.16.1 py27_0 birdhouse flower 0.8.2 py27_0 birdhouse java-jdk 8.0.45 3 birdhouse kombu 3.0.32 py27_0 birdhouse lapack95 3.0.0 7 birdhouse libuuid 1.0.3 2 birdhouse nginx 1.8.0 0 birdhouse owslib 0.11.2 py27_59 birdhouse pygbif 0.1.4 py27_0 birdhouse pyramid_celery 2.0.0 py27_0 birdhouse pysolr 3.3.2 py27_0 birdhouse pywps 3.2.5 py27_4 birdhouse qa-dkrz 0.5.9 2 birdhouse r-ncdf4 1.13 0 birdhouse redis 3.0.3 0 birdhouse repoze.sendmail 4.2 py27_0 birdhouse solr 5.2.1 1 birdhouse threddsclient 0.3.4 py27_0 birdhouse cairo 1.12.18 6
cffi 1.5.2 py27_0
chameleon 2.22 py27_0
click 6.3 py27_0
cligj 0.4.0 py27_0
libiconv 1.14 2 conda-forge cryptography 1.0.2 py27_0
curl 7.45.0 0
cycler 0.10.0 py27_0
dateutil 2.4.1 py27_0
decorator 4.0.9 py27_0
docutils 0.12 py27_2
enum34 1.1.2 py27_0
execnet 1.2.0 py27_0
fontconfig 2.11.1 5
freetype 2.5.5 0
funcsigs 1.0.2 py27_0
futures 3.0.3 py27_0
gcc 4.8.5 3
get_terminal_size 1.0.0 py27_0
gevent 1.1.1 py27_0
greenlet 0.4.9 py27_0
gunicorn 19.1.0 py27_0
harfbuzz 0.9.39 0
hdf4 4.2.11 0
hdf5 1.8.15.1 2
beautiful-soup 4.3.2 py27_0 https://conda.binstar.org/asmeurer dispel4py 1.0.1 py27_0 https://conda.binstar.org/birdhouse expat 2.1.0 1 https://conda.binstar.org/birdhouse genshi 0.7 py27_0 https://conda.binstar.org/birdhouse htmltmpl 1.22 py27_1 https://conda.binstar.org/birdhouse myproxyclient 1.4.3 py27_0 https://conda.binstar.org/birdhouse python-magic 0.4.6 py27_1 https://conda.binstar.org/birdhouse python-swiftclient 2.4.0 py27_0 https://conda.binstar.org/birdhouse icu 54.1 0
idna 2.0 py27_0
imagesize 0.7.0 py27_0
cartopy 0.14.2 np110py27_0 ioos cdo 1.7.0 2 ioos cf_units 1.1 py27_0 ioos click-plugins 1.0.3 py27_0 ioos compliance-checker 2.1.0 py27_3 ioos ecmwf_grib 1.14.7 3 ioos fiona 1.6.3 np110py27_5 ioos freexl 1.0.2 0 ioos gdal 1.11.4 np110py27_7 ioos geolinks 0.1.0 py27_1 ioos giflib 5.1.2 1 ioos gsl 2.1 0 ioos iris 1.9.2 np110py27_0 ioos jasper 1.900.1 5 ioos json-c 0.12 0 ioos libspatialindex 1.8.5 1 ioos libspatialite 4.3.0a 3 ioos munch 2.0.4 py27_0 ioos nco 4.5.5 1 ioos netcdf-fortran 4.4.2 0 ioos openjpeg 2.1.0 0 ioos petulant-bear 0.2.0 py27_0 ioos pycdo 1.2.6 py27_0 ioos pycsw 1.10.4 py27_0 ioos pyepsg 0.2.0 py27_1 ioos pyke 1.1.1 py27_2 ioos pyproj 1.9.5.1 py27_0 ioos python-ecmwf_grib 1.14.7 np110py27_1 ioos rtree 0.8.2 py27_2 ioos shapely 1.5.13 np110py27_1 ioos wicken 0.2.0 py27_0 ioos ipaddress 1.0.14 py27_0
ipykernel 4.3.1 py27_0
ipython 4.2.0 py27_0
ipython_genutils 0.1.0 py27_0
ipywidgets 4.1.1 py27_0
jbig 2.1 0
jinja2 2.8 py27_0
jpeg 8d 0
jsonschema 2.4.0 py27_0
jupyter 1.0.0 py27_1
jupyter_client 4.2.2 py27_0
jupyter_console 4.1.1 py27_0
jupyter_core 4.1.0 py27_0
kealib 1.4.5 0
krb5 1.13.2 0
libffi 3.0.13 0
libgdal 2.0.0 2
libgfortran 3.0.0 1
libnetcdf 4.3.3.1 3
libpng 1.6.17 0
libsodium 1.0.3 0
libtiff 4.0.6 1
libxml2 2.9.2 0
libxslt 1.1.28 0
lxml 3.6.0 py27_0
mako 1.0.4 py27_0
markupsafe 0.23 py27_0
matplotlib 1.5.1 np110py27_0
meld3 1.0.2 py27_0
mistune 0.7.2 py27_0
mkl 11.3.3 0
mock 2.0.0 py27_0
mongodb 2.4.6 0
mpi4py 2.0.0 py27_1
mpich2 1.4.1p1 0
nbconvert 4.1.0 py27_0
nbformat 4.0.1 py27_0
esmf 7.0.0 3 nesii esmpy 7.0.0 py27_3 nesii icclim 4.1.1 py27_0 nesii ocgis 1.3.1 py27_0 nesii udunits2 2.2.20 0 nesii netcdf4 1.2.2 np110py27_0
networkx 1.11 py27_0
nose 1.3.7 py27_1
notebook 4.1.0 py27_1
numpy 1.10.4 py27_2
openblas 0.2.14 0
openldap 2.4.36 1
openssl 1.0.2h 1
pandas 0.18.1 np110py27_0
pango 1.39.0 0
pastedeploy 1.5.2 py27_1
path.py 8.1.2 py27_1
patsy 0.4.0 np110py27_0
pbr 1.3.0 py27_0
pcre 8.31 0
pep8 1.7.0 py27_0
pexpect 3.3 py27_0
pickleshare 0.5 py27_0
pillow 3.1.1 py27_0
cloog 0.18.0 0 pingucarsti gmp 5.1.2 5 pingucarsti isl 0.12.2 1 pingucarsti mpc 1.0.1 0 pingucarsti mpfr 3.1.2 0 pingucarsti wget 1.15 2 pingucarsti pip 8.1.1 py27_0
pixman 0.32.6 0
postgresql 9.1.4 1
proj4 4.9.1 0
ptyprocess 0.5 py27_0
py 1.4.31 py27_0
pyasn1 0.1.9 py27_0
pycairo 1.10.0 py27_0
pycparser 2.14 py27_0
pygments 2.1.3 py27_0
pyopenssl 0.15.1 py27_2
pyparsing 2.0.3 py27_0
pyqt 4.11.4 py27_1
pyramid 1.5.7 py27_0
pyramid_chameleon 0.3 py27_0
pyramid_mako 1.0.2 py27_0
pytest 2.9.2 py27_0
pytest-cache 1.0 py27_0
pytest-pep8 1.0.6 py27_0
python 2.7.11 0
python-dateutil 2.5.0 py27_0
python-ldap 2.4.13 py27_0
pytz 2016.4 py27_0
pywget 2.2 py27_0
pyyaml 3.11 py27_4
pyzmq 15.2.0 py27_0
qt 4.8.7 1
qtconsole 4.1.1 py27_1
ncurses 5.9 4 r r 3.2.2 0 r r-base 3.2.2 0 r r-boot 1.3_17 r3.2.2_0a r r-class 7.3_14 r3.2.2_0a r r-cluster 2.0.3 r3.2.2_0a r r-codetools 0.2_14 r3.2.2_0a r r-foreign 0.8_66 r3.2.2_0a r r-kernsmooth 2.23_15 r3.2.2_0a r r-lattice 0.20_33 r3.2.2_0a r r-mass 7.3_45 r3.2.2_0a r r-matrix 1.2_2 r3.2.2_0a r r-mgcv 1.8_9 r3.2.2_0a r r-nlme 3.1_122 r3.2.2_0a r r-nnet 7.3_11 r3.2.2_0a r r-recommended 3.2.2 r3.2.2_0 r r-rpart 4.1_10 r3.2.2_0a r r-spatial 7.3_11 r3.2.2_0a r r-survival 2.38_3 r3.2.2_0a r rpy2 2.7.0 py27r3.2.2_0 r readline 6.2 2
redis-py 2.10.5 py27_0
repoze.lru 0.6 py27_0
requests 2.10.0 py27_0
scikit-learn 0.17.1 np110py27_1
scipy 0.17.0 np110py27_4
biggus 0.13.0 py27_0 scitools geos 3.4.2 4 scitools libmo_unpack 3.0 3 scitools proj.4 4.9.1 1 scitools pyshp 1.2.3 py27_0 scitools setuptools 20.1.1 py27_0
simplegeneric 0.8.1 py27_0
simplejson 3.8.2 py27_0
singledispatch 3.4.0.3 py27_0
sip 4.16.9 py27_0
six 1.10.0 py27_0
snowballstemmer 1.2.1 py27_0
sphinx 1.4.1 py27_0
sphinx_rtd_theme 0.1.9 py27_0
sqlalchemy 1.0.12 py27_0
sqlite 3.9.2 0
ssl_match_hostname 3.4.0.2 py27_0
statsmodels 0.6.1 np110py27_1
supervisor 3.1.3 py27_1
system 5.8 2
terminado 0.5 py27_1
tk 8.5.18 0
tornado 4.3 py27_0
traitlets 4.1.0 py27_0
transaction 1.4.4 py27_0
translationstring 1.3 py27_0
venusian 1.0 py27_0
webob 1.4.1 py27_0
wheel 0.29.0 py27_0
xerces-c 3.1.2 0
xz 5.0.5 1
yaml 0.1.6 0
zeromq 4.1.3 0
zlib 1.2.8 0
zope.deprecation 4.1.2 py27_0
zope.interface 4.1.2 py27_1
[nhempel@lsce3199 flyingpigeon]$

sradanov commented 8 years ago

Failed to install with pinned r-mclust=2.2

nilshempelmann commented 8 years ago

r-mclust is used in weatherregimes process. now pinned to r-mclust=5.1

Le 21/06/2016 à 12:03, sradanov a écrit :

Failed to install with pinned r-mclust=2.2

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nilshempelmann commented 8 years ago

icu=54.1

mcalvcas commented 8 years ago

Solving package specifications: . Error: Package missing in current linux-64 channels:

nilshempelmann commented 8 years ago

done.