Check de Duplicados na Coleciona-SUS

[anakatiacamilo]

Quando fui fazer o check de duplicado da Coleciona-SUS aconteceu o seguinte problema

COMANDO /home/javaapps/sbt-projects/DCDup/sh/DoubleCheckDuplicated.sh /bases/fiadmin2/DeDup/wrk/coleciona-sus/in_coleciona-sus_Sas.txt iso-8859-1 http://dedup.bireme.org/services lilacs_Sas LILACS_Sas_Seven /bases/fiadmin2/DeDup/wrk/coleciona-sus/out1_coleciona-sus_Sas.txt /bases/fiadmin2/DeDup/wrk/coleciona-sus/out2_coleciona-sus_Sas.txt /bases/fiadmin2/DeDup/wrk/coleciona-sus/out_ok_coleciona-sus_Sas.txt iso-8859-1

INICIO DO PROBLEMA

Remote check <<< 0 <<< 250 <<< 500 <<< 750 <<< 1000 <<< 1250 <<< 1500 <<< 1750 <<< 2000 <<< 2250 <<< 2500 <<< 2750 <<< 3000 <<< 3250 Url=http://dedup.bireme.org/services/raw/duplicates/lilacs_Sas/LILACS_Sas_Seven PostingString=[ LILACS_Sas|21533|An adapted ELISA method for differentiating pathogenic from nonpathogenic aPL by a beta 2 glycoprotein I dependency anticardiolipin assay|Thromb. res|2004|114|5-6|Levy, Roger Abramino//@//Meis, Ernesto de//@//Pierangeli, Silvia|573 LILACS_Sas|21534|Acculturation and Socioeconomic Position as Predictors of Coronary Calcification in a Multiethnic Sample|Circulation|2005|112|11|Roux, Ana V. Diez//@//Detrano, Robert//@//Jackson, Sharon//@//Jacobs Junior, David R//@//Schreiner, Pamela J//@//Szklo, Moyses|1557 LILACS_Sas|21535|A novel effect for annexin 1-derived peptide ac2-26: reduction of allergic inflammation in the rat|J. pharmacol. exp. ther|2005|313|3|Bandeira-Melo, Christianne//@//Bonavita, André Gustavo C//@//Diaz, Bruno L//@//Silva, Patrícia M R e//@//Carvalho, Vinícius F//@//Jose, Peter J//@//Flower, Roderick J//@//Perretti, Mauro//@//Martins, Marco A|1416 LILACS_Sas|21536|A new species of Wiedomys (Rodentia: Sigmodontinae) from Brazilian Cerrado|Mamm. biol|2005|70|1|Gonçalves, P R//@//Almeida, Francisca C//@//Bonvicino, Cibele R|46

MENSAGEM DE ERRO:

LILACS_Sas|22997|Apoptosis: target of cancer therapy|Clin. cancer res|2002|8||Ferreira, Carlos G//@//Epping, Mirjam//@//Frank A. E. Kruyt//@//Giaccone, Giuseppe|2024] Response=[ERROR:] [error] java.io.IOException: ERROR: [error] at org.bireme.dcdup.WebDoubleCheckDuplicated.rcheck(WebDoubleCheckDuplicated.scala:263) [error] at org.bireme.dcdup.WebDoubleCheckDuplicated.$anonfun$remoteCheck$1(WebDoubleCheckDuplicated.scala:214) [error] at org.bireme.dcdup.WebDoubleCheckDuplicated.$anonfun$remoteCheck$1$adapted(WebDoubleCheckDuplicated.scala:212) [error] at scala.collection.Iterator.foreach(Iterator.scala:929) [error] at scala.collection.Iterator.foreach$(Iterator.scala:929) [error] at org.bireme.dcdup.LineBatchIterator.foreach(LineBatchIterator.scala:24) [error] at org.bireme.dcdup.WebDoubleCheckDuplicated.remoteCheck(WebDoubleCheckDuplicated.scala:212) [error] at org.bireme.dcdup.WebDoubleCheckDuplicated.doubleCheck(WebDoubleCheckDuplicated.scala:108) [error] at org.bireme.dcdup.WebDoubleCheckDuplicated$.delayedEndpoint$org$bireme$dcdup$WebDoubleCheckDuplicated$1(WebDoubleCheckDuplicated.scala:67) [error] at org.bireme.dcdup.WebDoubleCheckDuplicated$delayedInit$body.apply(WebDoubleCheckDuplicated.scala:46) [error] at scala.Function0.apply$mcV$sp(Function0.scala:34) [error] at scala.Function0.apply$mcV$sp$(Function0.scala:34) [error] at scala.runtime.AbstractFunction0.apply$mcV$sp(AbstractFunction0.scala:12) [error] at scala.App.$anonfun$main$1$adapted(App.scala:76) [error] at scala.collection.immutable.List.foreach(List.scala:389) [error] at scala.App.main(App.scala:76) [error] at scala.App.main$(App.scala:74) [error] at org.bireme.dcdup.WebDoubleCheckDuplicated$.main(WebDoubleCheckDuplicated.scala:46) [error] at org.bireme.dcdup.WebDoubleCheckDuplicated.main(WebDoubleCheckDuplicated.scala) [error] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) [error] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) [error] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) [error] at java.lang.reflect.Method.invoke(Method.java:498) [error] at sbt.Run.invokeMain(Run.scala:93) [error] at sbt.Run.run0(Run.scala:87) [error] at sbt.Run.execute$1(Run.scala:65) [error] at sbt.Run.$anonfun$run$3(Run.scala:69) [error] at scala.runtime.java8.JFunction0$mcV$sp.apply(JFunction0$mcV$sp.java:12) [error] at scala.util.Try$.apply(Try.scala:209) [error] at sbt.Run.directExecute$1(Run.scala:69) [error] at sbt.Run.run(Run.scala:78) [error] at sbt.Defaults$.$anonfun$bgRunMainTask$6(Defaults.scala:1146) [error] at sbt.Defaults$.$anonfun$bgRunMainTask$6$adapted(Defaults.scala:1141) [error] at sbt.internal.BackgroundThreadPool.$anonfun$run$1(DefaultBackgroundJobService.scala:366) [error] at scala.runtime.java8.JFunction0$mcV$sp.apply(JFunction0$mcV$sp.java:12) [error] at scala.util.Try$.apply(Try.scala:209) [error] at sbt.internal.BackgroundThreadPool$BackgroundRunnable.run(DefaultBackgroundJobService.scala:289) [error] at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) [error] at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) [error] at java.lang.Thread.run(Thread.java:745) [error] (Compile / runMain) java.io.IOException: ERROR: [error] Total time: 712 s, completed Apr 5, 2018 4:34:43 PM /bases/fiadmin2/DeDup/scripts

Grata

[heitorbarbieri]

Corrigido no commit 7b0563a