…s were saved in the GUI.
(ii) added two simple bat files to quickly execute the crop_images GUI and the batch cropping.
(iii) modified default color for SMC channel to magenta, I find it is much clearer, but doesnt have to stay like this. (iv) tried to set contrast limits and default contrast differently. Different contrast max set by simple Otsu thresholding at the moment. Can be changed in the future. COULD NOT TEST THIS
…s were saved in the GUI. (ii) added two simple bat files to quickly execute the crop_images GUI and the batch cropping. (iii) modified default color for SMC channel to magenta, I find it is much clearer, but doesnt have to stay like this. (iv) tried to set contrast limits and default contrast differently. Different contrast max set by simple Otsu thresholding at the moment. Can be changed in the future. COULD NOT TEST THIS