bittremieux ANN-SoLo issues

bittremieux / ANN-SoLo

Spectral library searching using approximate nearest neighbor techniques.

Apache License 2.0

42 stars 19 forks source link

issues

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Modify Projection to Random Gaussian

#45 issararab opened 3 months ago
0
Rescoring features

#44 bittremieux opened 9 months ago
0
installation

#43 colin986 opened 1 year ago
8
Support for spectral library prediction from FASTA file

#42 issararab closed 4 months ago
0
Combine metadata and HDF5 spectral library in one single store

#41 issararab opened 1 year ago
0
Modify and test software to support new spectrum_utils API: 0.4.1

#40 issararab closed 3 months ago
1
Use ANN-SoLo CV term in mzTab

#39 bittremieux opened 1 year ago
0
Update README.md

#38 issararab closed 1 year ago
0
Adding spectra library hdf5 store support

#37 issararab closed 1 year ago
0
Can not run the module

#36 photoszzt closed 1 year ago
1
Add query spectra mzml and mzxml support

#35 issararab closed 1 year ago
0
Fix output file headers

#34 issararab opened 1 year ago
0
Facilitate project contributions

#33 bittremieux opened 2 years ago
0
Simplify installation

#32 bittremieux opened 2 years ago
0
Profile and improve runtime

#31 bittremieux opened 2 years ago
0
Mono-isotopic peak correction

#30 bittremieux opened 2 years ago
0
Automatically determine precursor and fragment m/z tolerance

#29 bittremieux opened 2 years ago
0
Complementary peaks in spectrum vectors

#28 bittremieux opened 2 years ago
0
Spectrum to vector conversion

#27 bittremieux opened 2 years ago
0
Multi-file searching

#26 bittremieux opened 2 years ago
0
Spectral library prediction

#25 bittremieux closed 4 months ago
0
Decoy spectrum generation

#24 bittremieux closed 1 year ago
1
Efficient internal library format

#23 bittremieux closed 1 year ago
0
Support library spectra formats

#22 bittremieux opened 2 years ago
2
Read query spectra from mzML and mzXML

#21 bittremieux closed 1 year ago
0
Output Documentation

#20 adamscharlotte opened 2 years ago
0
Rescore SSMs using semi-supervised learning

#19 issararab closed 2 years ago
4
GPU memory issues

#18 bittremieux opened 2 years ago
0
Recoring module of PSMs

#17 issararab closed 2 years ago
0
Problem with 0.3.3 install

#16 sooheon closed 2 years ago
2
OS Compatibility

#15 xLinkKnight closed 2 years ago
1
Support multi-GPU multi-node

#14 bittremieux opened 2 years ago
1
Low-memory support

#13 bittremieux opened 3 years ago
0
Add ELIB/DLIB spectral library support

#12 wfondrie opened 3 years ago
3
return code is always 1 (even on success)

#11 vnaum closed 4 years ago
1
AttributeError: 'MsmsSpectrum' object has no attribute 'query_identifier'

#10 vnaum closed 4 years ago
1
Feature Request: Accept Separate Input files for First/Second Search Stages

#9 bjreisman closed 4 years ago
2
Problem with v0.3.0 pip install

#8 wfondrie closed 4 years ago
1
ANN-SoLo as Python API

#7 bittremieux closed 4 years ago
1
Adding a public Python API

#6 wfondrie closed 4 years ago
0
Properly store spectral library index in mzTab

#5 bittremieux closed 4 years ago
0
specify a GPU when multiple GPUs present

#4 heejongkim closed 4 years ago
2
ann_solo_plot error -- TypeError: __init__() takes from 3 to 4 positional arguments but 5 were given

#3 lindsaypino closed 5 years ago
1
Support for blib spectral library format

#2 lindsaypino opened 5 years ago
0
compile failure for spectrum_match.cpp

#1 heejongkim closed 6 years ago
3