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bjornwallner / DockQ

DockQ is a single continuous quality measure for protein docked models based on the CAPRI evaluation protocol
MIT License
185 stars 46 forks source link

Multichain functionality in readme #8

Closed chaotify3317 closed 2 months ago

chaotify3317 commented 2 years ago

I try to run the readme example for multichain functionality and I get this.

Traceback (most recent call last): File "./DockQ.py", line 731, in main() File "./DockQ.py", line 568, in main native=make_two_chain_pdb_perm(native,nat_group1,nat_group2) File "./DockQ.py", line 452, in make_two_chain_pdb_perm exec_path=os.path.dirname(Path.abspath(sys.argv[0])) AttributeError: type object 'Path' has no attribute 'abspath'

chaotify3317 commented 2 years ago

I got the readme example to work--- except when I try to use my own file it says "no such file or directory."

kristianwant commented 2 years ago

Hi, what did you change from your previous comment to get the readme example to work? I'm struggling with the same issue.

chaotify3317 commented 2 years ago

I deleted all the extra DockQ files I had, updated ubuntu(my terminal), then installed "sudo apt install emboss" on ubuntu. Atleast that's how I got it to work.