AppImage required '--output' yet is given

[kaltu]

I am trying your new released AppImage distribution. However whether I ran 'fetalMRIReconstruction-x86_64.AppImage -h'

or 'fetalMRIReconstruction-x86_64.AppImage --output 050_SVR_cor.nii -i FS/050_006_CORONAL_PD_FAT_SAT.nii FS/050_003_SAGITTAL_PD_FAT_SAT.nii FS/050_002_AXIAL_PD_FAT_SAT.nii'

It always says -o is missing but it does given.

Any ideas?

[bkainz]

hm. That's the first time I have tried to generate such an AppImage. I'll investigate after the MICCAI deadline next week. (perhaps @schuhschuh can help?)

[schuhschuh]

@bkainz The AppRun script included does not pass the command arguments on to the actual executable.

AppRun:

#!/bin/sh

export LD_LIBRARY_PATH=.
cd "$(dirname "$0")"
exec ./reconstruction_GPU2

@kaltu You could try and extract the AppImage with

mkdir fetalMRIReconstruction-x86_64 && cd fetalMRIReconstruction-x86_64
mv path/to/fetalMRIReconstruction-x86_64.AppImage .
fetalMRIReconstruction-x86_64 --appimage-extract

and edit the fetalMRIReconstruction-x86_64/squashfs-root/AppRun script:

#!/bin/sh

export LD_LIBRARY_PATH=.
cd "$(dirname "$0")"
exec ./reconstruction_GPU2 "$@"

[bkainz]

@schuhschuh thank you very much! @kaltu perhaps this helps temporarily. After next week I'll update the AppImage accordingly!

[bkainz]

"After next week I'll" ... sorry, will look into this asap.