Closed dsclassen closed 1 year ago
So autoRG from RAW adds this "HEADER" information at the bottom of the file:
### HEADER:
#
#{
# "analysis": {
# "guinier": {
# "I0": "46.28524042231512",
# "I0_autorg_err": -1,
# "I0_err": 0.21348070639897057,
# "I0_est_err": 0.06504496469994685,
# "I0_fit_err": 0.21348070639897057,
# "Rg": "31.320635958017128",
# "Rg_autorg_err": -1,
# "Rg_err": 0.18516712577913863,
# "Rg_est_err": 0.07669747287296173,
# "Rg_fit_err": 0.18516712577913863,
# "nEnd": 64,
# "nStart": 9,
# "qEnd": "0.0413",
# "qRg_max": "1.2936049063380233",
# "qRg_min": "0.42063614091617",
# "qStart": "0.01343",
# "rsq": "0.9909284920737389"
# },
This information could be very useful for defining Rg-Min and RG-Max.
talked to Daniel. He suggested trying autorg
from ATSAS package. If you output as a Space Sep Values then it seems pretty easy to parse:
$autorg Tbg_VSG_final_for_Alex.dat -o output.ssv -f ssv
$cat output.ssv
47.0037 0.829443 1.29754e-07 2.31301e-10 1 20 0.870274 0 Tbg_VSG_final_for_Alex.dat
so uninterested users can run BilboMD without thinking.