We want to simplify our analysis as much as possible, focusing on pathogens for which we have high-quality truth sets for clade, reassortment, and recombination lineages.
We plan to use only H3N2 HA/NA and SARS-CoV-2 as pathogens with known phylogenetic groups as our truth sets, so we can remove all references to Zika and MERS from the repo.
We want to simplify our analysis as much as possible, focusing on pathogens for which we have high-quality truth sets for clade, reassortment, and recombination lineages.
We plan to use only H3N2 HA/NA and SARS-CoV-2 as pathogens with known phylogenetic groups as our truth sets, so we can remove all references to Zika and MERS from the repo.