We need a Docker image with TreeKnit and other dependencies installed. This is the only way we can hope to make our analysis reproducible with TreeKnit (and even then, TreeKnit has some stochastic outputs that have no random seed controls).
[x] Confirm image works on Windows
[x] Confirm image works on Mac Intel
[ ] Confirm image works on Mac ARM64
[x] Build Intel 64 image from personal laptop (non-arm64)
[x] Manually upload Intel 64 image to Docker Hub (sign up for free account)
[ ] Confirm that we can download and run Intel 64 image on M1 Mac with emulation
[ ] Build Intel 64 image with GitHub Actions in cartography repo
[ ] Upload Intel 64 image to Docker Hub from the GitHub Action
We need a Docker image with TreeKnit and other dependencies installed. This is the only way we can hope to make our analysis reproducible with TreeKnit (and even then, TreeKnit has some stochastic outputs that have no random seed controls).
nextstrain build