Closed jblachly closed 8 years ago
bam object should be another element in files array with type BAM ; mucor should ignore all type BAM
{ "bam": [ { "path": "project/dir1/sample1.bam" } ], "files": [ { "path": "project/dir1/sample1-a.vcf", "snpeff": false, "source": "VarScan", "type": "vcf" },
bam files and vcf files live harmoniously under the respective sample block.
bam object should be another element in files array with type BAM ; mucor should ignore all type BAM
{ "bam": [ { "path": "project/dir1/sample1.bam" } ], "files": [ { "path": "project/dir1/sample1-a.vcf", "snpeff": false, "source": "VarScan", "type": "vcf" },