blachlylab / mucor

GNU General Public License v3.0
12 stars 2 forks source link

Exchange HTSeq VCF reader for PyVCF #18

Open jblachly opened 7 years ago

jblachly commented 7 years ago

We are already using this in another project. PyVCF is nicely written and very fast. Library repo https://github.com/jamescasbon/PyVCF

Documentation https://pyvcf.readthedocs.io/en/latest/

kwkroll32 commented 7 years ago

Can I ask that we use branch 'issue-14' (or a subsequent branch of that) when we get started on this? Refactoring is already underway.

jblachly commented 7 years ago

Yes, I am all for issue branches, thanks for the heads up