The solvation of librt.so.1 in Ubuntu 16.04 server

blahah / transrate

Understand your transcriptome assembly

http://hibberdlab.com/transrate

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The solvation of librt.so.1 in Ubuntu 16.04 server #227

Open life404 opened 5 years ago

life404 commented 5 years ago

If you run transrate in Ubuntu 16.04 and have problems like follow when run salmon(0.6.0)

 ./salmon: relocation error: /tools/transrate-1.0.3-linux-x86_64/bin/librt.so.1: symbol __vdso_clock_gettime, version GLIBC_PRIVATE not defined in file libc.so.6 with link time reference

You just need remove or rename the librt.so.1 in /bin directory of transrate or the same directory with salmon.

manuelsmendoza commented 4 years ago

Doesnt work for me

olar785 commented 4 years ago

Nice thanks! For some reason after installing transrate I was getting: Dependencies are missing:

salmon (0.6.0) Even though all dependencies are included in that install version. Curiously, the problem was solved by just renaming the librt.so.1 file.