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blahah / transrate

Understand your transcriptome assembly
http://hibberdlab.com/transrate
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Update snap.rb to fix failure to build index #252

Open IdoBar opened 6 months ago

IdoBar commented 6 months ago

Try to rebuild the index with increased -locationSize to fix the following error:

Genome is too big for 4 byte genome locations. Specify a larger location size with -locationSize SNAP exited with exit code 1 from line 304 of file SNAPLib/GenomeIndex.cpp

A better solution may be to expose this parameter to transrate so the user can change it when invoking the pipeline.