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blaxterlab / blobology

Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a QC step (NO LONGER MANTAINED)
MIT License
46 stars 17 forks source link

Add command-line options to the blobology.bash driver script #4

Open sjackman opened 10 years ago

sjackman commented 10 years ago

Please add command-line options to the blobology.bash driver script for options such as ASSEMBLY and KMER.

sujaikumar commented 10 years ago

Hi Shaun. That's a great idea. I'll do that.

sjackman commented 10 years ago

Sweet. Thanks, Sujai.

xiaofengdong commented 10 years ago

Hi, Sujai! As we know the longer contigs usually have bigger coverage. So would you like to think about normalizing the coverage of the contigs in the blobolgy?