Open michoug opened 2 years ago
Hi Greg,
Apologies for the late response - yes, you definitely can plot genera, or any taxon, instead of OTUs. In fact, this is already done in the provided otusample_diet
. If you wanted to convert an existing OTU table, you could simply sum OTU rows together grouping by taxon. If you have a taxonomydata table, you could map each taxon to its genus to form groups.
Hope this helps, let me know if you have any other questions :)
Hi, I was wondering if there was an "easy" way to plot genera (probably obtained by summing the OTUs that are in this genus) instead of OTUs? Best Greg