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bli25 / RSEM_tutorial

A short tutorial on how to use RSEM
GNU General Public License v3.0
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ERROR installation #7

Open sekhwal opened 4 years ago

sekhwal commented 4 years ago

I am trying to install RSEM but not able to see software sub-directory. Moreover not sure what is $(your_favorite_location) in the clone command? Please advice..

bli25 commented 4 years ago

@sekhwal , do you want to install RSEM for nanopore data?

sekhwal commented 4 years ago

I have a mix set of data some MinION .fastq files and also have Illumina sequencing data .fasta files that downloaded from NCBI-SRA database. Is RSEM installation process work differently at different platform?

bli25 commented 4 years ago

https://deweylab.github.io/RSEM/README.html#compilation

bli25 commented 4 years ago

https://anaconda.org/bioconda/rsem