I activate my btk_env environment, where I have the following version of nodejs-> 14.14.0
Then I launch the command:
blobtools view folder_with_different_json_files
I receive the following output:
Initializing viewer
Traceback (most recent call last):
File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/lib/python3.8/site-packages/blobtools/lib/view.py", line 300, in static_view
driver, display = firefox_driver(args)
File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/lib/python3.8/site-packages/blobtools/lib/view.py", line 212, in firefox_driver
driver = webdriver.Firefox(
File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/lib/python3.8/site-packages/selenium/webdriver/firefox/webdriver.py", line 192, in init
self.service.start()
File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/lib/python3.8/site-packages/selenium/webdriver/common/service.py", line 106, in start
self.assert_process_still_running()
File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/lib/python3.8/site-packages/selenium/webdriver/common/service.py", line 119, in assert_process_still_running
raise WebDriverException(f"Service {self.path} unexpectedly exited. Status code was: {return_code}")
selenium.common.exceptions.WebDriverException: Message: Service geckodriver unexpectedly exited. Status code was: 64
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/bin/blobtools", line 8, in
sys.exit(cli())
File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/lib/python3.8/site-packages/blobtools/blobtools.py", line 105, in cli
sys.exit(subcommand())
File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/lib/python3.8/site-packages/blobtools/lib/view.py", line 495, in cli
main(args)
File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/lib/python3.8/site-packages/blobtools/lib/view.py", line 480, in main
static_view(args, loc, viewer)
File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/lib/python3.8/site-packages/blobtools/lib/view.py", line 302, in static_view
format_exc(err)
File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/lib/python3.8/traceback.py", line 167, in format_exc
return "".join(format_exception(*sys.exc_info(), limit=limit, chain=chain))
File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/lib/python3.8/traceback.py", line 120, in format_exception
return list(TracebackException(
File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/lib/python3.8/traceback.py", line 508, in init
self.stack = StackSummary.extract(
File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/lib/python3.8/traceback.py", line 340, in extract
if limit >= 0:
TypeError: '>=' not supported between instances of 'WebDriverException' and 'int'
sujaikumar
commented
1 year ago
Dear all,
I activate my btk_env environment, where I have the following version of nodejs-> 14.14.0
Then I launch the command: blobtools view folder_with_different_json_files
I receive the following output:
Initializing viewer Traceback (most recent call last): File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/lib/python3.8/site-packages/blobtools/lib/view.py", line 300, in static_view driver, display = firefox_driver(args) File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/lib/python3.8/site-packages/blobtools/lib/view.py", line 212, in firefox_driver driver = webdriver.Firefox( File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/lib/python3.8/site-packages/selenium/webdriver/firefox/webdriver.py", line 192, in init self.service.start() File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/lib/python3.8/site-packages/selenium/webdriver/common/service.py", line 106, in start self.assert_process_still_running() File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/lib/python3.8/site-packages/selenium/webdriver/common/service.py", line 119, in assert_process_still_running raise WebDriverException(f"Service {self.path} unexpectedly exited. Status code was: {return_code}") selenium.common.exceptions.WebDriverException: Message: Service geckodriver unexpectedly exited. Status code was: 64
During handling of the above exception, another exception occurred:
Traceback (most recent call last): File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/bin/blobtools", line 8, in
sys.exit(cli())
File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/lib/python3.8/site-packages/blobtools/blobtools.py", line 105, in cli
sys.exit(subcommand())
File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/lib/python3.8/site-packages/blobtools/lib/view.py", line 495, in cli
main(args)
File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/lib/python3.8/site-packages/blobtools/lib/view.py", line 480, in main
static_view(args, loc, viewer)
File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/lib/python3.8/site-packages/blobtools/lib/view.py", line 302, in static_view
format_exc(err)
File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/lib/python3.8/traceback.py", line 167, in format_exc
return "".join(format_exception(*sys.exc_info(), limit=limit, chain=chain))
File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/lib/python3.8/traceback.py", line 120, in format_exception
return list(TracebackException(
File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/lib/python3.8/traceback.py", line 508, in init
self.stack = StackSummary.extract(
File "/mnt/DATA/home/marcos/anaconda3/envs/snakemake/envs/btk_env/lib/python3.8/traceback.py", line 340, in extract
if limit >= 0:
TypeError: '>=' not supported between instances of 'WebDriverException' and 'int'
How can I solve that?