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bluegenes / MakeMyTranscriptome

assemble, annotate, and assess transcriptomes in a single step
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Manage_tools output #68

Closed nhartwic closed 8 years ago

nhartwic commented 8 years ago

When executing manage_tools, it should direct stdout to console not capture and hide it

nhartwic commented 8 years ago

Fixed by re-implementing the log system that got cut during refactor.

Current behavior is to capture the output from manage_tools when manage tools is called from anything other than a call to mmt tools, and when manage_tools is called by mmt_tools, the output will be forwarded to stdout.