Evaluation error: newsplit: out of vertex space.

bmansfeld / QTLseqr

QTLseqr is an R package for QTL mapping using NGS Bulk Segregant Analysis

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Evaluation error: newsplit: out of vertex space. #10

Closed biopig closed 5 years ago

biopig commented 5 years ago

when i use my data analysis, and i meet the error

Counting SNPs in each window...
Calculating tricube smoothed delta SNP index...
Error in mutate_impl(.data, dots) : 
  Evaluation error: newsplit: out of vertex space.
besides: There were 50 or more warnings (use warnings() to see the first 50)

my code is df_filt <- runGprimeAnalysis(SNPset = df_filt,windowSize = 1000,outlierFilter = "deltaSNP")

biopig commented 5 years ago

i have send my file to you email mansfeld@msu.edu

bmansfeld commented 5 years ago

Hi please see issue #9. Your window is very small. I recommend increasing it to at least 1Mb. Please read Magwene et al. on window size selection.