search

bmansfeld / QTLseqr

QTLseqr is an R package for QTL mapping using NGS Bulk Segregant Analysis
64 stars 42 forks source link

some error comes #14

Closed dksam closed 5 years ago

dksam commented 5 years ago

Import SNP data from file

df <-

  • importFromGATK(
  • file = file,
  • highBulk = HighBulk,
  • lowBulk = LowBulk,
  • chromList = Chroms
  • ) Error in file(file, "rt") : cannot open the connection In addition: Warning message: In file(file, "rt") : cannot open file 'SNPs_from_GATK.table': No such file or directory
bmansfeld commented 5 years ago

Sorry this is my mistake trying to quickly fix a related bug last night. Should be fixed from v 0.7.5.2 . Please post another issue if you have any. Thanks for catching this. Ben