Closed ehinderer closed 2 years ago
Apologies, the backend mongo database shutdown and needed to be restarted. The system should be available now.
Sorry for the late response. I will give this another shot soon, along with my other posted issue. Are you the appropriate contact person to reach out to regarding questions on the BMEG initiative. My team at Tufts CTSI are interested in learning more about it (the incorporation of pathway commons in particular) and may want to contribute if it's appropriate.
Yes, I lead the project.
GRIP is our query engine. It's designed to be a general purpose graph query engine that can plug into external data resources. BMEG is a specific graph build, largely concentrating on cancer related genomic, drug response and knowledge base resources. It is built from the scripts found in https://github.com/bmeg/bmeg-etl
You can read about some of the scientific goals at https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7049249/
Thanks! I haven't seen this article, I will give it a read. My team may reach out in the near future. Is there a preferred line of communication?
Email works: ellrott at ohsu dot edu
I'm trying to view the BMEG schema diagram but I'm running into what seem like HTTP 404 errors. From the code described here: