issues
search
bmorris3
/
shampoo
An open source digital holographic microscopy toolkit in Python.
http://shampoo.readthedocs.org/en/latest/
20
stars
11
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
MNT: Stop using ci-helpers in appveyor.yml
#40
pllim
opened
4 years ago
0
ModuleNotFoundError
#39
LYB111
opened
5 years ago
0
fixing float to index error
#38
bmorris3
closed
6 years ago
0
Error with shampoo.test()
#37
fishfishson
opened
6 years ago
2
Is the picture specific？
#36
lijie121
opened
6 years ago
6
TimeSeries based on h5py.File object
#35
LaurentRDC
closed
7 years ago
1
RuntimeWarning: invalid value encountered in sqrt np.sqrt(1.0 - first_term - second_term))
#34
tomdertech
opened
7 years ago
4
HDF5 Storage of ReconstructedWave object
#33
LaurentRDC
opened
7 years ago
5
Docs updates
#32
bmorris3
closed
7 years ago
0
adding salilab channel for fftw for rtd
#31
bmorris3
closed
7 years ago
0
Docs wishlist
#30
bmorris3
opened
7 years ago
0
Feature request: adjustable Fourier mask attribute
#29
bmorris3
opened
7 years ago
0
Switching to pyfftw only
#28
bmorris3
closed
7 years ago
1
Inefficient pyfftw implementation: order of magnitude speedups possible!
#27
bmorris3
closed
7 years ago
6
Replace `shift_peak`, other enhancements
#26
bmorris3
closed
7 years ago
1
Caching improvements
#25
bmorris3
closed
7 years ago
0
Fixing apodize bug
#24
bmorris3
closed
7 years ago
0
Efficiency: switch to using fftshift method
#23
bmorris3
closed
7 years ago
1
Double check atan2 usage
#22
bmorris3
opened
7 years ago
5
Efficiency: calculate G only on mask
#21
bmorris3
opened
7 years ago
0
Missing feature: magnification
#20
bmorris3
opened
7 years ago
2
Camera features to be controlled in the GUI
#19
LaurentRDC
opened
8 years ago
3
Raise warning if pyfftw not installed
#18
bmorris3
opened
8 years ago
1
Error Installing SHAMPOO
#17
m-elkholy
closed
8 years ago
3
Cropping holograms to a square by default
#16
bmorris3
closed
8 years ago
0
Reconstruction of non-square holograms raises error
#15
LaurentRDC
closed
8 years ago
7
GUI interface to SHAMPOO
#14
LaurentRDC
closed
3 years ago
14
Using conda for RTD, clearing up config files
#13
bsipocz
closed
8 years ago
6
Hyak batches
#12
bmorris3
closed
8 years ago
0
Adding example hologram, file
#11
bmorris3
closed
8 years ago
0
Find 3D coordinates for specimens
#10
bmorris3
closed
8 years ago
0
Multithreaded reconstruction, clustering, glue
#9
bmorris3
closed
8 years ago
1
Fixing crop shape bug
#8
bmorris3
closed
8 years ago
0
Mask out corners of FFT(hologram), support multiple reconstructions
#7
bmorris3
closed
8 years ago
0
Crop out just centers of holograms for reconstruction
#6
bmorris3
closed
8 years ago
0
Adding first basic unit tests
#5
bmorris3
closed
8 years ago
1
Trying h5py in conda dependencies
#4
bmorris3
closed
8 years ago
0
Trying to make travis build pass
#3
bmorris3
closed
8 years ago
1
Adopting astropy package template
#2
bmorris3
closed
8 years ago
0
Better aberration corrections
#1
bmorris3
closed
9 years ago
0