How to download the Electron Microscopy Dataset dataset to run the "227_mito_segm_using_models_from_Keras_Unet_collection.py"?"

bnsreenu / python_for_microscopists

https://www.youtube.com/channel/UC34rW-HtPJulxr5wp2Xa04w?sub_confirmation=1

MIT License

3.99k stars 2.42k forks source link

How to download the Electron Microscopy Dataset dataset to run the "227_mito_segm_using_models_from_Keras_Unet_collection.py"?" #17

Open tphankr opened 3 years ago

tphankr commented 3 years ago

I followed the clip and "227_mito_segm_using_models_from_Keras_Unet_collection.py" We must to have data in images folder and masks folder:

And, I download the data at the link (https://www.epfl.ch/labs/cvlab/data/data-em/). But I only can open it with Fiji software, not have the masks folder and images folder. I downloaded and had, as following:

Please help me have the data to run the file. Thank you @bnsreenu .

Francis-Ferri-personal commented 1 year ago

Did you solve it?