Unable to run `sudo phigaro-setup`

bobeobibo / phigaro

Phigaro is a scalable command-line tool for predicting phages and prophages

MIT License

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Unable to run `sudo phigaro-setup` #27

Closed gabriellovate closed 3 years ago

gabriellovate commented 3 years ago

(phigaro) ➜ ~ sudo phigaro-setup
sudo: phigaro-setup: command not found

gabriellovate commented 3 years ago

I didn´t have locate

PollyTikhonova commented 3 years ago

Please, follow the manual setup instructions https://phigaro.readthedocs.io/en/latest/getting_started/#installation: you need to download hmms, copy config.yml, change paths of hmmer and prodigal, write a path to the downloaded hmms and put this file to $HOME/.phigaro directory.

gabriellovate commented 3 years ago

@PollyTikhonova the problem was that I did not have locate installed. Sorry for bothering you and thank you for the support.

PollyTikhonova commented 3 years ago

No problem, just thought that maybe you did not have an opportunity to install locate