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bodegalab
/
irescue
A tool to quantify transposable elements expression in scRNA-seq
MIT License
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Merge 1.1.0-beta.2
#16
bepoli
closed
4 months ago
0
IRescue error: Traceback (most recent call last): File "/apps/software/gcc-12.1.0/python/3.10.5/bin/irescue", line 8, in <module> sys.exit(main())
#15
tcmartinez
closed
4 months ago
3
Add options --min-bp-overlap and --min-fraction-overlap to set a minimum overlap between read and TE
#14
bepoli
closed
1 year ago
0
Add option "--dumpEC" to write a log table with Equivalence Classes and UMI mismatch corrections
#13
bepoli
closed
1 year ago
0
improved check for complete graphs in UMI dedup
#12
bepoli
closed
1 year ago
0
[fix] skip records without cb tag
#11
bepoli
closed
1 year ago
0
Better error handling
#10
bepoli
closed
1 year ago
0
Better error handling
#9
bepoli
closed
1 year ago
0
skip chr if not in rmsk
#8
bepoli
closed
1 year ago
0
[fix] last barcode missing from matrix
#7
bepoli
closed
1 year ago
0
Add tests
#6
bepoli
closed
1 year ago
0
skip multiprocessing when using 1 cpu
#5
bepoli
closed
1 year ago
0
Confued number of clusters by TE matrix
#3
xiangyupan
closed
4 months ago
3
Release v1.0.2
#2
bepoli
closed
1 year ago
0
ValueError: range() arg 3 must not be zero
#1
xiangyupan
closed
1 year ago
15