Convert ADMIXTOOLS warnings to R warnings

bodkan / admixr

An R package for reproducible and automated ADMIXTOOLS analyses

https://bodkan.net/admixr

Other

28 stars 9 forks source link

Convert ADMIXTOOLS warnings to R warnings #5

Closed bodkan closed 5 years ago

bodkan commented 7 years ago

Right now, all lines in log files that contain a warning are filtered out and the user doesn't know about them (example here).

Detect the warnings in each line of an output file and convert them to R warnings for the user.

bodkan commented 6 years ago

Uhh, there is a problem - I'm not sure what kind of input generally triggers those warnings. 😃 If anyone has an example that triggers warnings, can you share them? Hard to test this without an example. Thanks!

Alternatively, I could crawl through ADMIXTOOLS' codebase, but I don't feel like doing that at the moment.

bodkan commented 5 years ago

Closed in 862a439.