ENH: Add the ability to fetch the latest GTDB database (v220) to `get-gtdb-data`

bokulich-lab / RESCRIPt

REference Sequence annotation and CuRatIon Pipeline

BSD 3-Clause "New" or "Revised" License

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ENH: Add the ability to fetch the latest GTDB database (v220) to `get-gtdb-data` #183

Closed mikerobeson closed 3 weeks ago

mikerobeson commented 2 months ago

GTDB has just released an updated version of their database v220. Detailed information about this release is here. We should add the appropriate versions to get_dtdb.py, by adding to this dictionary, and set the default here. Then update plugin_setup.py here

Sadly it looks like they changed some of the tar.gz files to fna.gz. 🤨

nbokulich commented 3 weeks ago

fixed by #184