bokulich-lab / nf-ducken

Workflow to process amplicon meta-analysis data, from NCBI accession IDs to taxonomic diversity metrics.
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Double-check process launches (esp. intermediate) dependent on empty-param flags #66

Closed lina-kim closed 11 months ago

lina-kim commented 11 months ago

Archived as these are no longer necessary. Our code no longer depends on case and switch forks, and instead allows for two specific entrypoints in FASTQ download (fondue) and local FASTQ import.