bokulich-lab / nf-ducken

Workflow to process amplicon meta-analysis data, from NCBI accession IDs to taxonomic diversity metrics.
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Fixes skipped processes for nonlocal refs #68

Closed lina-kim closed 1 year ago

lina-kim commented 1 year ago

Closes #67. When no local reference files were given for closed-reference OTU clustering or feature classification, the workflow initially skipped all of these processes -- sometimes halting the entire workflow. For some reason, removing the when directive from these processes did the trick.