bokulich-lab / nf-ducken

Workflow to process amplicon meta-analysis data, from NCBI accession IDs to taxonomic diversity metrics.
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Split process execution into separate workflows by input type #74

Closed lina-kim closed 11 months ago

lina-kim commented 11 months ago

Currently, different subsets of process executions are found in the same workflow (pipe_16s.nf) and controlled by if/then statements and switches. It would be far neater to have these split into separate workflows, enabling use of the same modules. This would also make the various QIIME 2 actions easier to implement.