search

bokulich-lab / q2-assembly

QIIME 2 plugin for (meta)genome assembly.
BSD 3-Clause "New" or "Revised" License
4 stars 12 forks source link

FIX: set the default thread count to 1 in all actions #30

Closed misialq closed 1 year ago

misialq commented 1 year ago

Closes #29.

codecov[bot] commented 1 year ago

Codecov Report

Merging #30 (ef3095f) into main (cf5224f) will not change coverage. The diff coverage is 100.00%.

@@           Coverage Diff           @@
##             main      #30   +/-   ##
=======================================
  Coverage   98.66%   98.66%           
=======================================
  Files          25       25           
  Lines        1269     1269           
=======================================
  Hits         1252     1252           
  Misses         17       17
Impacted Files Coverage Δ
q2_assembly/_action_params.py 100.00% <ø> (ø)
q2_assembly/bowtie2/indexing.py 100.00% <ø> (ø)
q2_assembly/bowtie2/mapping.py 100.00% <ø> (ø)
q2_assembly/bowtie2/tests/test_mapping.py 99.21% <ø> (ø)
q2_assembly/iss/iss.py 91.46% <ø> (ø)
q2_assembly/iss/tests/test_iss.py 98.97% <ø> (ø)
q2_assembly/megahit/megahit.py 100.00% <ø> (ø)
q2_assembly/megahit/tests/test_megahit.py 99.01% <ø> (ø)
q2_assembly/spades/spades.py 100.00% <ø> (ø)
q2_assembly/bowtie2/tests/test_indexing.py 97.61% <100.00%> (ø)

:mega: We’re building smart automated test selection to slash your CI/CD build times. Learn more

misialq commented 1 year ago

ping @gregcaporaso 🔔 would this do?