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bokulich-lab / q2-assembly

QIIME 2 plugin for (meta)genome assembly.
BSD 3-Clause "New" or "Revised" License
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FIX: correct indexing params spec #45

Closed misialq closed 1 year ago

misialq commented 1 year ago

This PR fixes specification of one of the indexing params in _action_params.py - missing Str is causing a q2cli error:

AttributeError: <class 'qiime2.core.type.grammar.PredicateExp'> object has no attribute 'duplicate'

Additionally, one of the pre-commit hooks is updated (isort).

codecov[bot] commented 1 year ago

Codecov Report

Merging #45 (dd56ce3) into main (8f369c5) will not change coverage. The diff coverage is n/a.

@@           Coverage Diff           @@
##             main      #45   +/-   ##
=======================================
  Coverage   98.39%   98.39%           
=======================================
  Files          25       25           
  Lines        1309     1309           
=======================================
  Hits         1288     1288           
  Misses         21       21
Impacted Files Coverage Δ
q2_assembly/_action_params.py 100.00% <ø> (ø)

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