Is your feature request related to a problem? Please describe.
No. It would be great, though, if the evaluate-contigs action could output a table (as an additional artifact, similarly how the revamped evaluate-busco from q2-moshpit does) containing most important stats (e.g., N50, L50, #contigs, total length, etc.) per sample. We could then use this table e.g. to filter samples for re-assembly based on some thresholds.
Is your feature request related to a problem? Please describe. No. It would be great, though, if the
evaluate-contigs
action could output a table (as an additional artifact, similarly how the revampedevaluate-busco
from q2-moshpit does) containing most important stats (e.g., N50, L50, #contigs, total length, etc.) per sample. We could then use this table e.g. to filter samples for re-assembly based on some thresholds.