It appears that when neither paired- nor single-read sequences were saved as artifacts, the action (get-sequences or get-all) still returns successfully (as format validation passes even on empty fastq files). It should, however, fail when there are no files in either of the two.
Note: I'm not sure what caused this behaviour - still investigating. Will add steps to reproduce when found. Regardless of that, I think this behaviour should not be expected.
It appears that when neither paired- nor single-read sequences were saved as artifacts, the action (
get-sequencesorget-all) still returns successfully (as format validation passes even on empty fastq files). It should, however, fail when there are no files in either of the two.Note: I'm not sure what caused this behaviour - still investigating. Will add steps to reproduce when found. Regardless of that, I think this behaviour should not be expected.