bokulich-lab / q2-types-genomics

QIIME 2 types for genomics plugins.
BSD 3-Clause "New" or "Revised" License
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ENH: add eggnog/diamond DB validation #58

Open misialq opened 1 year ago

misialq commented 1 year ago

Is your feature request related to a problem? Please describe. Currently, no database validation is performed when importing those two into a QIIME 2 artifact.

Describe the solution you'd like For diamond databases, perhaps we could use the diamond dbinfo command (presumably it would fail if the DB is corrupted?). For eggnog we need to investigate a bit.