Implement GenomeData[Genes] type - Githubissues

bokulich-lab / q2-types-genomics

QIIME 2 types for genomics plugins.

BSD 3-Clause "New" or "Revised" License

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Implement GenomeData[Genes] type #6

Closed misialq closed 3 years ago

misialq commented 3 years ago

Based on the gene positional information from GFF files (see #5), gene prediction step will extract gene sequences from corresponding MAGs. We need a new type to store FASTA files corresponding to those genes.

Acceptance criteria:

validates on reading in FASTA files containing multiple sequence entries (genes)
corresponds to something like:
```
genome1: genes.fa
genome2: genes.fa
...
```