bokulich-lab / q2-types-genomics

QIIME 2 types for genomics plugins.
BSD 3-Clause "New" or "Revised" License
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ENH: Semantic type for HMMER database #63

Closed Sann5 closed 6 months ago

Sann5 commented 1 year ago

Is your feature request related to a problem? No, but it's related to another issue (see link below). In a nutshell there is a need for a semantic type to represent a HMMER database in Qiime2.

Describe the solution you'd like The Semantic type should be able to manage an arbitrary number of organisms from the HMMER database. E.g:

download_eggnog_data.py -s -H -d 2

This would download HMMER database for these two groups of organisms of interest.

Context: