bonsai-team / matam

Mapping-Assisted Targeted-Assembly for Metagenomics
GNU Affero General Public License v3.0
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Questions on output file #102

Closed nduan1 closed 3 years ago

nduan1 commented 3 years ago

Hi,

Could anyone explain the output files for me? I am thinking these two files are useful for downstream analysis, am I right? 1."aligned.sortmerna_vs_SILVA_128_SSURef_NR95_b10_m10.scr_filt_geo_90pct.ovgb_i100_o50.cpts_N1_E1.read_metanode_component.tab" and 2."aligned.sortmerna_vs_SILVA_128_SSURef_NR95_b10_m10.scr_filt_geo_90pct.ovgb_i100_o50.cpts_N1_E1.read_metanode_component_taxo.tab"

I am a little confused about the two columns of number in each of these files, which one is the abundance?

file1 file2

Thank you!

Ning