bonsai-team / matam

Mapping-Assisted Targeted-Assembly for Metagenomics
GNU Affero General Public License v3.0
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Output files clarification #104

Open NataliHB opened 3 years ago

NataliHB commented 3 years ago

Hi,

I'm trying to figure out which one of the output files includes the assembled 16s rRNA sequences obtained with the pipeline, as I would like to use these sequences in a comparative analyses with 16s rRNA amplicon data. I leaning towards contigs.NR.min_500bp.fasta but if its possible could you please provide and explanation of the output files.

Any help is very much appreciated!

Natali

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