bonsai-team / matam

Mapping-Assisted Targeted-Assembly for Metagenomics
GNU Affero General Public License v3.0
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Improve scaffolding by using paired-end reads #33

Open ppericard opened 7 years ago

ppericard commented 7 years ago

Paired-end reads could be used to help us chose between compatible contigs that are mapping on the same reference, thus allowing us to discriminate between 2 close species mapping on the same reference sequence, and decreasing the risk of creating chimeras.

Has to be done after #31