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bonsai-team / matam

Mapping-Assisted Targeted-Assembly for Metagenomics
GNU Affero General Public License v3.0
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BIOM format #40

Open ycl6 opened 6 years ago

ycl6 commented 6 years ago

Hi,

Any chance of producing the results, i.e. abundance and taxonomy assignment, in BIOM format?

ppericard commented 6 years ago

Hi. This is a good idea and we will look into this probably after the next release

ppericard commented 6 years ago

Right now we are already working on outputing a contingency table to compare abundances when working with multiple datasets

ycl6 commented 6 years ago

Cool @ppericard, right now I'm writing a script to parse the results.